Stem-loop mdo-mir-150

Accession

MI0012504

Description

Monodelphis domestica mdo-mir-150 precursor miRNA

Sequence

1940 reads, 38.0 reads per million, 5 experiments

cuccggggccccuUCUCCCAACCCUUGUACCAGAGUccaucagagacCCGGUACGGGCUGUGGGGGACggggagucggggcu
((((((..((((.(((((((...((((((((.(.((((....).)))).))))))))...))))))).))))..))))))..

Structure

--      gg    u       ACC        A A   - a 
  cuccgg  cccc UCUCCCA   CUUGUACC G GUc c u
  ||||||  |||| |||||||   |||||||| | ||| |  
  ggggcu  gggg AGGGGGU   GGGCAUGG C cag g c
uc      ga    C       GUC        C -   a a 

Annotation confidence High

Genome context

ref|NC_077230.1|: 443937541-443937622 [-]

Mature mdo-miR-150-5p

• Accession: MIMAT0012748
• Description: Monodelphis domestica mdo-miR-150-5p mature miRNA
• Sequence: 14 - UCUCCCAACCCUUGUACCAGAGU - 36
• Evidence: experimental ; Illumina [2]

Mature mdo-miR-150-3p

• Accession: MIMAT0026940
• Description: Monodelphis domestica mdo-miR-150-3p mature miRNA
• Sequence: 48 - CCGGUACGGGCUGUGGGGGAC - 68
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45