miRBase entry: mdo-mir-363

Stem-loop mdo-mir-363


Accession
MI0012512
Description
Monodelphis domestica mdo-mir-363 precursor miRNA


Sequence

17694 reads, 965.0 reads per million, 5 experiments
uuuugcuguguCGGGUGGAUCACGAUGCAAAUUUugauaaguuuaauaggagaaaaAAUUGCACGGUAUCCAUCUGUAAaccgcaagac
((((((.((..(((((((((..((.(((((.((((..................)))).)))))))..)))))))))...)).)))))).

Structure
-      u  -gu         CA  A     A    gauaaguu 
 uuuugc gu   CGGGUGGAU  CG UGCAA UUUu        u
 |||||| ||   |||||||||  || ||||| ||||         
 agaacg ca   GUCUACCUA  GC ACGUU Aaaa        a
c      c  AAU         UG  -     A    agaggaua 


Annotation confidence High
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Genome context
ref|NC_077235.2|: 40126135-40126222 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from mdo-mir-363
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-363-5p

Accession MIMAT0012755
Description Monodelphis domestica mdo-miR-363-5p mature miRNA
Sequence 12 - CGGGUGGAUCACGAUGCAAAUUU - 34
Evidence not_experimental

Mature mdo-miR-363-3p

Accession MIMAT0061150
Description Monodelphis domestica mdo-miR-363-3p mature miRNA
Sequence 57 - AAUUGCACGGUAUCCAUCUGUAA - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39