miRBase entry: mdo-mir-190b

Stem-loop mdo-mir-190b


Accession
MI0012513
Description
Monodelphis domestica mdo-mir-190b precursor miRNA


Sequence

457 reads, 26.0 reads per million, 5 experiments
cuucugugUGAUAUGUUUGAUAUUGGGUUGUuugauugggaaucaACUAAAUGUCAAACAUAUUCUUAcagcgguu
((.(((((.(((((((((((((((.((((((((......))).))))).)))))))))))))))..))))).))..

Structure
--  u     -U               G     -   ga 
  cu cugug  GAUAUGUUUGAUAUU GGUUG Uuu  u
  || |||||  ||||||||||||||| ||||| |||   
  gg gacAU  UUAUACAAACUGUAA UCAac aag  u
uu  c     UC               A     u   gg 


Annotation confidence High
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Genome context
ref|NC_077228.1|: 172828294-172828369 [+]

Database links

Mature mdo-miR-190b-5p

Accession MIMAT0012756
Description Monodelphis domestica mdo-miR-190b-5p mature miRNA
Sequence 9 - UGAUAUGUUUGAUAUUGGGUUGU - 31
Evidence experimental
Illumina [2]

Mature mdo-miR-190b-3p

Accession MIMAT0061151
Description Monodelphis domestica mdo-miR-190b-3p mature miRNA
Sequence 46 - ACUAAAUGUCAAACAUAUUCUUA - 68
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39