Stem-loop mml-mir-543

Accession

MI0012544

Description

Macaca mulatta mml-mir-543 precursor miRNA

Sequence

434 reads, 3 reads per million, 7 experiments

gguacuuaaugaGAAGUUGCCCGUGUCUUUUUCGcuuuauuugugacgAAACAUUCGCGGUGCACUUCUUuuucaguauc
((((((.((.(((((((.(((((((....((((((.........).)))))....))))).))))))))).)).))))))

Structure

      u  u       U  -     UCUU     - uuu 
gguacu aa gaGAAGU GC CCGUG    UUUCG c   a
|||||| || ||||||| || |||||    ||||| |   u
cuauga uu UUCUUCA CG GGCGC    AAAgc g   u
      c  u       -  U     UUAC     a ugu 

Annotation confidence Medium

Genome context

chr7: 163366417-163366496 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from mml-mir-543

Mature mml-miR-543-3p

• Accession: MIMAT0012787
• Description: Macaca mulatta mml-miR-543-3p mature miRNA
• Sequence: 49 - AAACAUUCGCGGUGCACUUCUU - 70
• Evidence: experimental ; Illumina [2]

Mature mml-miR-543-5p

• Accession: MIMAT0026953
• Description: Macaca mulatta mml-miR-543-5p mature miRNA
• Sequence: 13 - GAAGUUGCCCGUGUCUUUUUCG - 34
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45