miRBase entry: oan-mir-29b-2

Stem-loop oan-mir-29b-2


Accession
MI0012554
Description
Ornithorhynchus anatinus oan-mir-29b-2 precursor miRNA


Sequence

9955 reads, 207.0 reads per million, 5 experiments
cuucuggaagCUGGUUUCACAUGGUGGCUUAGAuuuuuccaucucuguaucUAGCACCAUUUGAAAUCAGUGUUuuaggag
(((((((((((((((((((.((((((.((.((((..............)))))))))))).)))))))))).)))))))))

Structure
         -          C      G  U    uuuucc 
cuucuggaa gCUGGUUUCA AUGGUG CU AGAu      a
||||||||| |||||||||| |||||| || ||||       
gaggauuUU UGACUAAAGU UACCAC GA Ucua      u
         G          U      -  -    ugucuc 


Annotation confidence High
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Genome context
7: 63785630-63785710 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from oan-mir-29b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oan-miR-29b-2-5p

Accession MIMAT0061406
Description Ornithorhynchus anatinus oan-miR-29b-2-5p mature miRNA
Sequence 11 - CUGGUUUCACAUGGUGGCUUAGA - 33
Evidence experimental
Illumina [1]

Mature oan-miR-29b-3p

Accession MIMAT0006809
Description Ornithorhynchus anatinus oan-miR-29b-3p mature miRNA
Sequence 52 - UAGCACCAUUUGAAAUCAGUGUU - 74
Evidence not_experimental
Database links

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39