miRBase entry: ptr-mir-664b

Stem-loop ptr-mir-664b


Accession
MI0012562
Description
Pan troglodytes ptr-mir-664b precursor miRNA


Sequence

1920 reads, 36.0 reads per million, 24 experiments
acauuaaaaUGGGCUAAGGGAGAUGAUUGGGUagaaaguauuauucuaUUCAUUUGCCUCCCGGCCUACAaaaaug
.((((....((((((..(((((.(((.(((((((((.......))))))))).))).)))))))))))....))))

Structure
a    aaaa      AA     A   U         ag 
 cauu    UGGGCU  GGGAG UGA UGGGUagaa  u
 ||||    ||||||  ||||| ||| |||||||||  a
 guaa    AUCCGG  CCCUC GUU ACUUaucuu  u
-    aaAC      --     C   U         au 


Annotation confidence High
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Genome context
chrX: 154297805-154297880 [+]

Database links

Mature ptr-miR-664b-5p

Accession MIMAT0052412
Description Pan troglodytes ptr-miR-664b-5p mature miRNA
Sequence 10 - UGGGCUAAGGGAGAUGAUUGGGU - 32
Evidence not_experimental

Mature ptr-miR-664b-3p

Accession MIMAT0012800
Description Pan troglodytes ptr-miR-664b-3p mature miRNA
Sequence 49 - UUCAUUUGCCUCCCGGCCUACA - 70
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39