Stem-loop rno-mir-504

Accession

MI0012592

Description

Rattus norvegicus rno-mir-504 precursor miRNA

Literature search

24 open access papers mention rno-mir-504
(101 sentences)

Sequence

42722 reads, 35.0 reads per million, 397 experiments

cuguugggaGACCCUGGUCUGCACUCUGUCUGgaaacuuacagaAGGGAGAGCAGGGCAGGGUUUCccauacagagg
((((((((((((((((.(((((.((((.((((........))))..)))).))))).)))))))))))).))))...

Structure

---    -            G     A    -G    gaa 
   cugu ugggaGACCCUG UCUGC CUCU  UCUG   a
   |||| |||||||||||| ||||| ||||  ||||    
   gaca accCUUUGGGAC GGACG GAGG  agac   c
gga    u            G     A    GA    auu 

Annotation confidence High

Genome context

Unknown

Mature rno-miR-504-5p

• Accession: MIMAT0012830
• Description: Rattus norvegicus rno-miR-504-5p mature miRNA
• Sequence: 10 - GACCCUGGUCUGCACUCUGUCUG - 32
• Evidence: not_experimental

Mature rno-miR-504-3p

• Accession: MIMAT0061426
• Description: Rattus norvegicus rno-miR-504-3p mature miRNA
• Sequence: 45 - AGGGAGAGCAGGGCAGGGUUUC - 66
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39