Stem-loop rno-mir-615

Accession

MI0012597

Description

Rattus norvegicus rno-mir-615 precursor miRNA

Literature search

16 open access papers mention rno-mir-615
(22 sentences)

Sequence

36606 reads, 44.0 reads per million, 408 experiments

ucgggaggggcgggagGGGGGUCCCCGGUGCUCGGAUCUcgagggugcuuauuguucggUCCGAGCCUGGGUCUCCCUCUUccccccauccc
..((((((((.((((((((((..(((((.((((((((..((((.(.......).)))))))))))))))))..)))))))))))))).))))

Structure

uc    -    c          UC     U        CU    g ug 
  ggga gggg gggagGGGGG  CCCGG GCUCGGAU  cgag g  c
  |||| |||| ||||||||||  ||||| ||||||||  |||| |  u
  cccu cccc ccUUCUCCCU  GGGUC CGAGCCUg  gcuu u  u
--    a    -          CU     -        --    g ua 

Annotation confidence High

Genome context

chr7: 144629019-144629110 [+]

Mature rno-miR-615-5p

• Accession: MIMAT0012835
• Description: Rattus norvegicus rno-miR-615-5p mature miRNA
• Sequence: 17 - GGGGGUCCCCGGUGCUCGGAUCU - 39
• Evidence: not_experimental

Mature rno-miR-615-3p

• Accession: MIMAT0061427
• Description: Rattus norvegicus rno-miR-615-3p mature miRNA
• Sequence: 60 - UCCGAGCCUGGGUCUCCCUCUU - 81
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39