Stem-loop rno-mir-668

Accession

MI0012601

Description

Rattus norvegicus rno-mir-668 precursor miRNA

Literature search

15 open access papers mention rno-mir-668
(24 sentences)

Sequence

27965 reads, 39.0 reads per million, 313 experiments

gGUAAGUGUGCCUCGGGUGAGCAUgcacuuaacguagguguaUGUCACUCGGCUCGGCCCACUACCca
((((.(((.(((((((((((.((((((((((...))))))))))))))))))...))).)))))))..

Structure

--    A   U   ---        G          a 
  gGUA GUG GCC   UCGGGUGA CAUgcacuua  
  |||| ||| |||   |||||||| |||||||||| c
  CCAU CAC CGG   GGCUCACU GUauguggau  
ac    -   C   CUC        -          g 

Annotation confidence High

Genome context

chr6: 133885141-133885208 [+]

Clustered miRNAs

20 other miRNAs are < 10 kb from rno-mir-668

Mature rno-miR-668-5p

• Accession: MIMAT0052023
• Description: Rattus norvegicus rno-miR-668-5p mature miRNA
• Sequence: 2 - GUAAGUGUGCCUCGGGUGAGCAU - 24
• Evidence: not_experimental

Mature rno-miR-668-3p

• Accession: MIMAT0012839
• Description: Rattus norvegicus rno-miR-668-3p mature miRNA
• Sequence: 43 - UGUCACUCGGCUCGGCCCACUACC - 66
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39