Stem-loop rno-mir-935

Accession

MI0012607

Description

Rattus norvegicus rno-mir-935 precursor miRNA

Literature search

3 open access papers mention rno-mir-935
(5 sentences)

Sequence

14110 reads, 40.0 reads per million, 138 experiments

ggcggcggcgcgggcggcAGUGGCGGGAGCGGCCCCUCGGCcauccuccgucugcCCAGUUACCGCUUCCGCUACCGCcgccgcucccgcu
(((((.((.((((.((((.(((((((((((((...((.(((............))).))...))))))))))))).)))))))))))))))

Structure

     c  c    g    A             CCC  C   caucc 
ggcgg gg gcgg cggc GUGGCGGGAGCGG   CU GGC     u
||||| || |||| |||| |||||||||||||   || |||      
ucgcc cu cgcc gcCG CAUCGCCUUCGCC   GA Ccg     c
     -  -    -    C             AUU  C   ucugc 

Annotation confidence High

Genome context

chr1: 64330549-64330639 [-]

Mature rno-miR-935-5p

• Accession: MIMAT0052025
• Description: Rattus norvegicus rno-miR-935-5p mature miRNA
• Sequence: 19 - AGUGGCGGGAGCGGCCCCUCGGC - 41
• Evidence: not_experimental

Mature rno-miR-935-3p

• Accession: MIMAT0012845
• Description: Rattus norvegicus rno-miR-935-3p mature miRNA
• Sequence: 56 - CCAGUUACCGCUUCCGCUACCGC - 78
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39