Stem-loop hvt-mir-H12

Accession

MI0012625

Description

Herpesvirus of turkeys hvt-mir-H12 precursor miRNA

Sequence

uacUUUCUUAUGGACCGCCGAGGUGUGUCuauucguuaaCAGCUAGGCCGUCCAUGAGGUCGUA
(((..((((((((((.(((.((.(((............))).)).))).))))))))))..)))

Structure

   UU          C   G  G   GUCua 
uac  UCUUAUGGAC GCC AG UGU     u
|||  |||||||||| ||| || |||      
AUG  GGAGUACCUG CGG UC ACa     u
   CU          C   A  G   auugc 

Annotation confidence Not enough data

Comments

Ywo et al. named this sequences hvt-mir-4 in [1].

Genome context

Unknown

Mature hvt-miR-H12-5p

• Accession: MIMAT0012863
• Description: Herpesvirus of turkeys hvt-miR-H12-5p mature miRNA
• Sequence: 4 - UUUCUUAUGGACCGCCGAGGUGUGUC - 29
• Evidence: experimental ; cloned [1]

Mature hvt-miR-H12-3p

• Accession: MIMAT0012864
• Description: Herpesvirus of turkeys hvt-miR-H12-3p mature miRNA
• Sequence: 40 - CAGCUAGGCCGUCCAUGAGGUCGUA - 64
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19403687
   Novel microRNAs (miRNAs) encoded by herpesvirus of Turkeys: evidence of miRNA evolution by duplication
   "Yao Y, Zhao Y, Smith LP, Watson M, Nair V"
   "J Virol (2009) 83:6969-6973