Stem-loop hvt-mir-H14

Accession

MI0012627

Description

Herpesvirus of turkeys hvt-mir-H14 precursor miRNA

Sequence

cggacUCAUUCAGCGGGCAAUGUAGACUGUguaccaagugacAGCUACAUUGCCCGCUGGGUUUCug
((((...((((((((((((((((((.((((.(((...))))))))))))))))))))))))).))))

Structure

    cUC                  A    g   c 
cgga   AUUCAGCGGGCAAUGUAG CUGU uac  
||||   |||||||||||||||||| |||| ||| a
guCU   UGGGUCGCCCGUUACAUC GAca gug  
    --U                  -    -   a 

Annotation confidence Not enough data

Comments

Ywo et al. named this sequences hvt-mir-6 in [1].

Genome context

Unknown

Mature hvt-miR-H14-5p

• Accession: MIMAT0012866
• Description: Herpesvirus of turkeys hvt-miR-H14-5p mature miRNA
• Sequence: 6 - UCAUUCAGCGGGCAAUGUAGACUGU - 30
• Evidence: experimental ; cloned [1]

Mature hvt-miR-H14-3p

• Accession: MIMAT0012867
• Description: Herpesvirus of turkeys hvt-miR-H14-3p mature miRNA
• Sequence: 43 - AGCUACAUUGCCCGCUGGGUUUC - 65
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19403687
   Novel microRNAs (miRNAs) encoded by herpesvirus of Turkeys: evidence of miRNA evolution by duplication
   "Yao Y, Zhao Y, Smith LP, Watson M, Nair V"
   "J Virol (2009) 83:6969-6973