Stem-loop hvt-mir-H15

Accession

MI0012628

Description

Herpesvirus of turkeys hvt-mir-H15 precursor miRNA

Sequence

cucUCGGAACAGGCGUAUUUUUUGCguauuuuaugaagcagCAAAGAUACGCAUGGGCUGAGGG
(((((((..((.((((((((((.((((.((....)).)).)))))))))))).))..)))))))

Structure

       AA  G          U  -  a  u 
cucUCGG  CA GCGUAUUUUU GC gu uu u
|||||||  || |||||||||| || || ||  
GGGAGUC  GU CGCAUAGAAA Cg cg ag a
       GG  A          -  a  a  u 

Annotation confidence Not enough data

Comments

Ywo et al. named this sequences hvt-mir-7 in [1].

Genome context

Unknown

Mature hvt-miR-H15-5p

• Accession: MIMAT0012868
• Description: Herpesvirus of turkeys hvt-miR-H15-5p mature miRNA
• Sequence: 4 - UCGGAACAGGCGUAUUUUUUGC - 25
• Evidence: experimental ; cloned [1]

Mature hvt-miR-H15-3p

• Accession: MIMAT0012869
• Description: Herpesvirus of turkeys hvt-miR-H15-3p mature miRNA
• Sequence: 42 - CAAAGAUACGCAUGGGCUGAGGG - 64
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19403687
   Novel microRNAs (miRNAs) encoded by herpesvirus of Turkeys: evidence of miRNA evolution by duplication
   "Yao Y, Zhao Y, Smith LP, Watson M, Nair V"
   "J Virol (2009) 83:6969-6973