Stem-loop eca-mir-211

Accession

MI0012657

Description

Equus caballus eca-mir-211 precursor miRNA

Literature search

5 open access papers mention eca-mir-211
(22 sentences)

Sequence

80903 reads, 166.0 reads per million, 181 experiments

ugugacuugugggcUUCCCUUUGUCAUCCUUUGCCUagggcucugagugggGCAGGGACUGCAAAGGGGUGCUcaguugucaccucu
.(((((...(((((.(((((((((..(((((.((((...(((...))).)))))))))..))))))))).)))))...)))))....

Structure

---u     uug     U         CA     U    agg   c 
    gugac   ugggc UCCCUUUGU  UCCUU GCCU   gcu  
    |||||   ||||| |||||||||  ||||| ||||   ||| u
    cacug   acUCG GGGGAAACG  AGGGA CGgg   uga  
ucuc     uug     U         UC     -    --g   g 

Annotation confidence High

Genome context

1: 109178753-109178839 [-]

Mature eca-miR-211-5p

• Accession: MIMAT0012901
• Description: Equus caballus eca-miR-211-5p mature miRNA
• Sequence: 15 - UUCCCUUUGUCAUCCUUUGCCU - 36
• Evidence: not_experimental

Mature eca-miR-211-3p

• Accession: MIMAT0051318
• Description: Equus caballus eca-miR-211-3p mature miRNA
• Sequence: 52 - GCAGGGACUGCAAAGGGGUGCU - 73
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131