Stem-loop eca-mir-124-1

Accession

MI0012662

Description

Equus caballus eca-mir-124-1 precursor miRNA

Literature search

1 open access papers mention eca-mir-124-1
(1 sentences)

Sequence

7289 reads, 282.0 reads per million, 82 experiments

cucucCGUGUUCACAGCGGACCUUGAUUuaaauguccauacaauUAAGGCACGCGGUGAAUGCCaaga
.(((..((((((((.(((..((((((((.............))))))))..))).))))))))..)))

Structure

c   cC        A   GA        uaaau 
 ucu  GUGUUCAC GCG  CCUUGAUU     g
 |||  |||||||| |||  ||||||||     u
 aga  CGUAAGUG CGC  GGAAUuaa     c
-   aC        G   AC        cauac 

Annotation confidence High

Genome context

2: 58293859-58293926 [-]

Mature eca-miR-124-1-5p

• Accession: MIMAT0051319
• Description: Equus caballus eca-miR-124-1-5p mature miRNA
• Sequence: 6 - CGUGUUCACAGCGGACCUUGAUU - 28
• Evidence: not_experimental

Mature eca-miR-124-3p

• Accession: MIMAT0012906
• Description: Equus caballus eca-miR-124-3p mature miRNA
• Sequence: 45 - UAAGGCACGCGGUGAAUGCC - 64
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131