Stem-loop eca-mir-492-1

Accession

MI0012676

Description

Equus caballus eca-mir-492-1 precursor miRNA

Sequence

37 reads, 27.0 reads per million, 18 experiments

gAGGAGCUGCGGGACAAGAUUCUUggggccaccauugagaacuccaagauuguucugcagaucgac
...((.(((((((((((...((((((((.............))))))))))))))))))).))...

Structure

gAG  G           GAU        ccacc 
   GA CUGCGGGACAA   UCUUgggg     a
   || |||||||||||   ||||||||     u
   cu gacgucuuguu   agaaccuc     u
cag  a           ---        aagag 

Annotation confidence Not enough data

Genome context

7: 56776687-56776752 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from eca-mir-492-1

Mature eca-miR-492-5p

• Accession: MIMAT0012920
• Description: Equus caballus eca-miR-492-5p mature miRNA
• Sequence: 2 - AGGAGCUGCGGGACAAGAUUCUU - 24
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131