Stem-loop eca-mir-1261

Accession

MI0012680

Description

Equus caballus eca-mir-1261 precursor miRNA

Sequence

23 reads, 1.0 reads per million, 14 experiments

ugcuGUGGAUUAGGCUUUGGCUUaagggaauauuguggcugauuugaucuucuauccagaccacugaagcuuucuccauaucagc
.((((((((..(((((((((......(((......(((..(((...)))..))))))......)))))))))..))))...))))

Structure

u    ---    UU         CUUaag   auauug   cu   u 
 gcuG   UGGA  AGGCUUUGG      gga      ugg  gau  
 ||||   ||||  |||||||||      |||      |||  ||| u
 cgac   accu  uucgaaguc      ccu      auc  cua  
-    uau    cu         accaga   ------   uu   g 

Annotation confidence Not enough data

Genome context

3: 92401001-92401085 [+]

Mature eca-miR-1261-5p

• Accession: MIMAT0012924
• Description: Equus caballus eca-miR-1261-5p mature miRNA
• Sequence: 5 - GUGGAUUAGGCUUUGGCUU - 23
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131