Stem-loop eca-mir-684

Accession

MI0012685

Description

Equus caballus eca-mir-684 precursor miRNA

Literature search

2 open access papers mention eca-mir-684
(3 sentences)

Sequence

9 reads, 0.0 reads per million, 9 experiments

guagggcaaucugucuuuaggaagggauagauuacucuaaaagaaaugaauccgagauAGUUUUCCCUUCAAUUCAGgcauguugu
.....(((((.(((((....(((((((.(((((((((................))).))))))))))))).....))))).)))))

Structure

guagg     c     -uuag       u      -   uaaaaga 
     gcaau ugucu     gaaggga agauua cuc       a
     ||||| |||||     ||||||| |||||| |||        
     uguug acgGA     CUUCCCU UUUGAu gag       a
-----     u     CUUAA       -      a   ccuaagu 

Annotation confidence Not enough data

Genome context

3: 44922346-44922431 [-]

Mature eca-miR-684-3p

• Accession: MIMAT0012930
• Description: Equus caballus eca-miR-684-3p mature miRNA
• Sequence: 59 - AGUUUUCCCUUCAAUUCAG - 77
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131