Stem-loop eca-mir-129a

Accession

MI0012687

Description

Equus caballus eca-mir-129a precursor miRNA

Sequence

35395 reads, 642.0 reads per million, 180 experiments

uggauCUUUUUGCGGUCUGGGCUUGCuguuccucucaacaguagucaggAAGCCCUUACCCCAAAAAGUAUcu
.(((((((((((.(((..((((((.(((..(..((....))..).))).))))))..))).))))))).))))

Structure

u    -       C   CU      G   uu cu  c 
 ggau CUUUUUG GGU  GGGCUU Cug  c  cu a
 |||| ||||||| |||  |||||| |||  |  ||  
 ucUA GAAAAAC CCA  CCCGAA gac  g  ga a
-    U       C   UU      g   -u au  c 

Annotation confidence High

Genome context

4: 83490174-83490246 [+]

Mature eca-miR-129a-5p

• Accession: MIMAT0012932
• Description: Equus caballus eca-miR-129a-5p mature miRNA
• Sequence: 6 - CUUUUUGCGGUCUGGGCUUGC - 26
• Evidence: experimental ; Illumina [1]

Mature eca-miR-129a-3p

• Accession: MIMAT0012933
• Description: Equus caballus eca-miR-129a-3p mature miRNA
• Sequence: 50 - AAGCCCUUACCCCAAAAAGUAU - 71
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131