Stem-loop eca-mir-153-1

Accession

MI0012690

Description

Equus caballus eca-mir-153-1 precursor miRNA

Sequence

9906 reads, 115.0 reads per million, 91 experiments

guGUCAUUUUUGUGAUGUUGCAGCUaguaauaugagcccagUUGCAUAGUCACAAAAGUGAUCauug
((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).)))..

Structure

--   -             GU       -a  aa 
  guG UCAUUUUUGUGAU  UGCAGCU  gu  u
  ||| |||||||||||||  |||||||  ||  a
  uaC AGUGAAAACACUG  ACGUUga  cg  u
gu   U             AU       cc  ag 

Annotation confidence High

Genome context

4: 107916660-107916726 [-]

Mature eca-miR-153-1-5p

• Accession: MIMAT0051332
• Description: Equus caballus eca-miR-153-1-5p mature miRNA
• Sequence: 3 - GUCAUUUUUGUGAUGUUGCAGCU - 25
• Evidence: not_experimental

Mature eca-miR-153-3p

• Accession: MIMAT0012936
• Description: Equus caballus eca-miR-153-3p mature miRNA
• Sequence: 42 - UUGCAUAGUCACAAAAGUGAUC - 63
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131