Stem-loop eca-mir-182

Accession

MI0012691

Description

Equus caballus eca-mir-182 precursor miRNA

Sequence

519 reads, 79 reads per million, 1 experiments

accauuUUUGGCAAUGGUAGAACUCACACUGgugagguaaugggauccggugguucuagacuugccaacuauggu
(((((..(((((((...((((((...((((((..............))))))))))))...)))))))..)))))

Structure

     uU       UGG      UCA      ugaggu 
accau  UUGGCAA   UAGAAC   CACUGg      a
|||||  |||||||   ||||||   ||||||       
uggua  aaccguu   aucuug   guggcc      a
     uc       cag      ---      uagggu 

Annotation confidence Not enough data

Genome context

chr4: 84467059-84467133 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from eca-mir-182

Mature eca-miR-182

• Accession: MIMAT0012937
• Description: Equus caballus eca-miR-182 mature miRNA
• Sequence: 7 - UUUGGCAAUGGUAGAACUCACACUG - 31
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131