Stem-loop eca-mir-29a

Accession

MI0012694

Description

Equus caballus eca-mir-29a precursor miRNA

Literature search

3 open access papers mention eca-mir-29a
(5 sentences)

Sequence

2231 reads, 338 reads per million, 1 experiments

gaugacugauuucuuuugguguucagagucaauauaauuuucUAGCACCAUCUGAAAUCGGUUAu
.((((((((((((...(((((((.((((...........)))))))))))...))))))))))))

Structure

g            uuu       c    ucaa 
 augacugauuuc   ugguguu agag    u
 ||||||||||||   ||||||| ||||    a
 uAUUGGCUAAAG   ACCACGA Ucuu    u
-            UCU       -    uuaa 

Annotation confidence Not enough data

Genome context

chr4: 85326728-85326792 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from eca-mir-29a

Mature eca-miR-29a

• Accession: MIMAT0012940
• Description: Equus caballus eca-miR-29a mature miRNA
• Sequence: 43 - UAGCACCAUCUGAAAUCGGUUA - 64
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131