Stem-loop eca-mir-490

Accession

MI0012698

Description

Equus caballus eca-mir-490 precursor miRNA

Sequence

108 reads, 16 reads per million, 1 experiments

ucgacaCCAUGGAUCUCCAGGUGGGUcacguuuagagauacacCAACCUGGAGGACUCCAUGCUGuuga
((((((.(((((((((((((((.(((...((........))))).)))))))))..)))))).))))))

Structure

      C      --         G   cac  uua 
ucgaca CAUGGA  UCUCCAGGU GGU   gu   g
|||||| ||||||  ||||||||| |||   ||    
aguuGU GUACCU  GGAGGUCCA Cca   ca   a
      C      CA         A   ---  uag 

Annotation confidence Not enough data

Genome context

chr4: 90776976-90777044 [+]

Mature eca-miR-490-5p

• Accession: MIMAT0012944
• Description: Equus caballus eca-miR-490-5p mature miRNA
• Sequence: 7 - CCAUGGAUCUCCAGGUGGGU - 26
• Evidence: not_experimental

Mature eca-miR-490-3p

• Accession: MIMAT0012945
• Description: Equus caballus eca-miR-490-3p mature miRNA
• Sequence: 44 - CAACCUGGAGGACUCCAUGCUG - 65
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131