Stem-loop eca-mir-101-1

Accession

MI0012703

Description

Equus caballus eca-mir-101-1 precursor miRNA

Literature search

1 open access papers mention eca-mir-101-1
(2 sentences)

Sequence

4890792 reads, 4114.0 reads per million, 237 experiments

cuCAGUUAUCACAGUGCUGAUGCUGucaguucuaaagGUACAGUACUGUGAUAACUGAA
.((((((((((((((((((.((((............)))))))))))))))))))))).

Structure

c                  A    Gucag 
 uCAGUUAUCACAGUGCUG UGCU     u
 |||||||||||||||||| ||||      
 AGUCAAUAGUGUCAUGAC AUGg     u
A                  -    aaauc 

Annotation confidence High

Genome context

5: 92613111-92613169 [+]

Mature eca-miR-101-1-5p

• Accession: MIMAT0061089
• Description: Equus caballus eca-miR-101-1-5p mature miRNA
• Sequence: 3 - CAGUUAUCACAGUGCUGAUGCUG - 25
• Evidence: experimental ; unknown

Mature eca-miR-101-2-3p

• Accession: MIMAT0012951
• Description: Equus caballus eca-miR-101-2-3p mature miRNA
• Sequence: 38 - GUACAGUACUGUGAUAACUGAA - 59
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131