Stem-loop eca-mir-101-1

Accession

MI0012703

Description

Equus caballus eca-mir-101-1 precursor miRNA

Literature search

1 open access papers mention eca-mir-101-1
(2 sentences)

Sequence

5571 reads, 843 reads per million, 1 experiments

cucaguuaucacagugcugaugcugucaguucuaaaggUACAGUACUGUGAUAACUGAA
.((((((((((((((((((.((((............)))))))))))))))))))))).

Structure

c                  a    gucag 
 ucaguuaucacagugcug ugcu     u
 |||||||||||||||||| ||||      
 AGUCAAUAGUGUCAUGAC AUgg     u
A                  -    aaauc 

Annotation confidence High

Genome context

chr5: 95527930-95527988 [+]

Mature eca-miR-101

• Accession: MIMAT0012951
• Description: Equus caballus eca-miR-101 mature miRNA
• Sequence: 39 - UACAGUACUGUGAUAACUGAA - 59
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131