Stem-loop eca-mir-137

Accession

MI0012705

Description

Equus caballus eca-mir-137 precursor miRNA

Literature search

7 open access papers mention eca-mir-137
(11 sentences)

Sequence

1179 reads, 58.0 reads per million, 67 experiments

cuucggugACGGGUAUUCUUGGGUGGAUAAUacggauuacguugUUAUUGCUUAAGAAUACGCGUAGUcgagg
((((((..(((.(((((((((((((.((((((((.....)).))))))))))))))))))).)))..))))))

Structure

      ug   G             G      -  g 
cuucgg  ACG GUAUUCUUGGGUG AUAAUa cg a
||||||  ||| ||||||||||||| |||||| || u
ggagcU  UGC CAUAAGAAUUCGU UAUUgu gc u
      GA   G             -      u  a 

Annotation confidence High

Genome context

5: 64453422-64453494 [+]

Mature eca-miR-137-5p

• Accession: MIMAT0051342
• Description: Equus caballus eca-miR-137-5p mature miRNA
• Sequence: 9 - ACGGGUAUUCUUGGGUGGAUAAU - 31
• Evidence: not_experimental

Mature eca-miR-137-3p

• Accession: MIMAT0012953
• Description: Equus caballus eca-miR-137-3p mature miRNA
• Sequence: 45 - UUAUUGCUUAAGAAUACGCGUAGU - 68
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131