Stem-loop eca-mir-1905b

Accession

MI0012709

Description

Equus caballus eca-mir-1905b precursor miRNA

Sequence

cugcugcuggaugcgcuugaugguugcccccuuggggcccacCACCAGCCCCACUACGCGGUAG
((((((((((.((.(((.(.((((.(((((...)))))..))))).)))..))))).)))))))

Structure

       -   a  -c   u a    -u     c 
cugcugc ugg ug  gcu g uggu  gcccc  
||||||| ||| ||  ||| | ||||  ||||| u
GAUGGCG AUC AC  CGA C ACca  cgggg  
       C   -  CC   C -    cc     u 

Annotation confidence Not enough data

Genome context

chr5: 42088659-42088722 [-]

Mature eca-miR-1905b

• Accession: MIMAT0012957
• Description: Equus caballus eca-miR-1905b mature miRNA
• Sequence: 43 - CACCAGCCCCACUACGCGGUAG - 64
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131