Stem-loop eca-mir-205

Accession

MI0012713

Description

Equus caballus eca-mir-205 precursor miRNA

Literature search

10 open access papers mention eca-mir-205
(84 sentences)

Sequence

1028859 reads, 1861.0 reads per million, 207 experiments

cucuugUCCUUCAUUCCACCGGAGUCUGucucauacccaaccaGAUUUCAGUGGAGUGAAGUUCAggag
((((((..(((((((((((.((((((((.............)))))))).)))))))))))..))))))

Structure

      UC           C        ucuca 
cucuug  CUUCAUUCCAC GGAGUCUG     u
||||||  ||||||||||| ||||||||     a
gaggAC  GAAGUGAGGUG CUUUAGac     c
      UU           A        caacc 

Annotation confidence High

Genome context

5: 26052124-26052192 [-]

Mature eca-miR-205-5p

• Accession: MIMAT0012962
• Description: Equus caballus eca-miR-205-5p mature miRNA
• Sequence: 7 - UCCUUCAUUCCACCGGAGUCUG - 28
• Evidence: not_experimental

Mature eca-miR-205-3p

• Accession: MIMAT0051348
• Description: Equus caballus eca-miR-205-3p mature miRNA
• Sequence: 44 - GAUUUCAGUGGAGUGAAGUUCA - 65
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131