Stem-loop eca-mir-29b-2

Accession

MI0012715

Description

Equus caballus eca-mir-29b-2 precursor miRNA

Literature search

3 open access papers mention eca-mir-29b-2
(6 sentences)

Sequence

314756 reads, 1569.0 reads per million, 201 experiments

cuucuggaagCUGGUUUCACAUGGUGGCUUAGAuuuuuccaucuuuguaucUAGCACCAUUUGAAAUCAGUGUUuuaggag
(((((((((((((((((((.((((((.((.((((..............)))))))))))).)))))))))).)))))))))

Structure

         -          C      G  U    uuuucc 
cuucuggaa gCUGGUUUCA AUGGUG CU AGAu      a
||||||||| |||||||||| |||||| || ||||       
gaggauuUU UGACUAAAGU UACCAC GA Ucua      u
         G          U      -  -    uguuuc 

Annotation confidence High

Genome context

5: 27511140-27511220 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from eca-mir-29b-2

Mature eca-miR-29b-2-5p

• Accession: MIMAT0051339
• Description: Equus caballus eca-miR-29b-2-5p mature miRNA
• Sequence: 11 - CUGGUUUCACAUGGUGGCUUAGA - 33
• Evidence: not_experimental

Mature eca-miR-29b-3p

• Accession: MIMAT0012941
• Description: Equus caballus eca-miR-29b-3p mature miRNA
• Sequence: 52 - UAGCACCAUUUGAAAUCAGUGUU - 74
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131