Stem-loop eca-mir-29b-2

Accession

MI0012715

Description

Equus caballus eca-mir-29b-2 precursor miRNA

Literature search

2 open access papers mention eca-mir-29b-2
(3 sentences)

Sequence

94 reads, 14 reads per million, 1 experiments

cuucuggaagcugguuucacaugguggcuuagauuuuuccaucuuuguaucUAGCACCAUUUGAAAUCAGUGUUuuaggag
(((((((((((((((((((.((((((.((.((((..............)))))))))))).)))))))))).)))))))))

Structure

         -          c      g  u    uuuucc 
cuucuggaa gcugguuuca auggug cu agau      a
||||||||| |||||||||| |||||| || ||||       
gaggauuUU UGACUAAAGU UACCAC GA Ucua      u
         G          U      -  -    uguuuc 

Annotation confidence Not enough data

Genome context

chr5: 30271159-30271239 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from eca-mir-29b-2

Mature eca-miR-29b

• Accession: MIMAT0012941
• Description: Equus caballus eca-miR-29b mature miRNA
• Sequence: 52 - UAGCACCAUUUGAAAUCAGUGUU - 74
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131