Stem-loop eca-mir-92b

Accession

MI0012719

Description

Equus caballus eca-mir-92b precursor miRNA

Literature search

9 open access papers mention eca-mir-92b
(21 sentences)

Sequence

976972 reads, 3446.0 reads per million, 229 experiments

gggcgggAGGGACGGGACGCGGUGCAGUGUUguucuuucccccgccaaUAUUGCACUCGUCCCGGCCUCCggccc
((((.(((((..(((((((.((((((((((((.............))))))))))))))))))).))))).))))

Structure

    g     GA       C            uucuu 
gggc ggAGG  CGGGACG GGUGCAGUGUUg     u
|||| |||||  ||||||| ||||||||||||     c
cccg CCUCC  GCCCUGC UCACGUUAUaac     c
    g     -G       -            cgccc 

Annotation confidence High

Genome context

5: 39317356-39317430 [-]

Mature eca-miR-92b-5p

• Accession: MIMAT0051352
• Description: Equus caballus eca-miR-92b-5p mature miRNA
• Sequence: 8 - AGGGACGGGACGCGGUGCAGUGUU - 31
• Evidence: not_experimental

Mature eca-miR-92b-3p

• Accession: MIMAT0012966
• Description: Equus caballus eca-miR-92b-3p mature miRNA
• Sequence: 49 - UAUUGCACUCGUCCCGGCCUCC - 70
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131