Stem-loop eca-mir-149

Accession

MI0012725

Description

Equus caballus eca-mir-149 precursor miRNA

Sequence

104 reads, 16 reads per million, 1 experiments

gccggcgcccaggcUCUGGCUCCGUGUCUUCACUCCCguguguguccgaggagggagggagggacgggggcugugcuggggcugccgga
.(((((((((.(((.(.(.((((((.(((((.(((((.(.(.......).).)))))))))).)))))).).).))).)))).))))).

Structure

g     -    a   U U G      G     A     g g gu 
 ccggc gccc ggc C G CUCCGU UCUUC CUCCC u u  g
 ||||| |||| ||| | | |||||| ||||| ||||| | |  u
 ggccg cggg ucg g c ggggca ggagg gaggg g a  c
a     u    g   u u g      g     -     a g gc 

Annotation confidence Not enough data

Genome context

chr6: 25975930-25976018 [+]

Mature eca-miR-149

• Accession: MIMAT0012973
• Description: Equus caballus eca-miR-149 mature miRNA
• Sequence: 15 - UCUGGCUCCGUGUCUUCACUCCC - 37
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131