Stem-loop eca-mir-23a

Accession

MI0012737

Description

Equus caballus eca-mir-23a precursor miRNA

Sequence

1268 reads, 192 reads per million, 1 experiments

ggccggcugggguuccuggggaugggauuugcugcuugucacaaAUCACAUUGCCAGGGAUUUCCaaccgacc
((.(((.((((((((((((.((((.((((((.((.....)))))))).)))).))))))).))))).))).))

Structure

  c   c     -       g    g      c  c 
gg cgg ugggg uuccugg gaug gauuug ug u
|| ||| ||||| ||||||| |||| |||||| || u
cc gcc aCCUU AGGGACC UUAC CUAaac ac g
  a   a     U       G    A      -  u 

Annotation confidence Not enough data

Genome context

chr7: 44929817-44929889 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from eca-mir-23a

Mature eca-miR-23a

• Accession: MIMAT0012986
• Description: Equus caballus eca-miR-23a mature miRNA
• Sequence: 45 - AUCACAUUGCCAGGGAUUUCC - 65
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131