Stem-loop eca-mir-326

Accession

MI0012740

Description

Equus caballus eca-mir-326 precursor miRNA

Literature search

4 open access papers mention eca-mir-326
(4 sentences)

Sequence

20919 reads, 126.0 reads per million, 175 experiments

cucgucugucuguugggcUGGAGGCAGGGCCUUUGUGAAGGcgaguugugcugggaucgCCUCUGGGCCCUUCCUCCAGCccagaggcggauuca
...((((((((.((((((((((((.(((((((......((((((............))))))..))))))).))))))))))))))))))))...

Structure

cuc        g            C       UUGUGA      guugu 
   gucugucu uugggcUGGAGG AGGGCCU      AGGcga     g
   |||||||| |||||||||||| |||||||      ||||||      
   uaggcgga gaccCGACCUCC UCCCGGG      UCCgcu     c
acu        -            U       ----UC      agggu 

Annotation confidence High

Genome context

7: 70997165-70997259 [+]

Mature eca-miR-326-5p

• Accession: MIMAT0051365
• Description: Equus caballus eca-miR-326-5p mature miRNA
• Sequence: 19 - UGGAGGCAGGGCCUUUGUGAAGG - 41
• Evidence: not_experimental

Mature eca-miR-326-3p

• Accession: MIMAT0012989
• Description: Equus caballus eca-miR-326-3p mature miRNA
• Sequence: 60 - CCUCUGGGCCCUUCCUCCAGC - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131