Stem-loop eca-mir-7-2

Accession

MI0012744

Description

Equus caballus eca-mir-7-2 precursor miRNA

Literature search

1 open access papers mention eca-mir-7-2
(4 sentences)

Sequence

259999 reads, 908.0 reads per million, 182 experiments

ggucuagugcugugUGGAAGACUAGUGAUUUUGUUGUUuugacguacuaugaCAACAAAUCACGGCUUCCUCAcagcguaggcu
((((((.(((((((.(((((.((.(((((((.((((((.((......)).)))))))))))))))))))).)))))))))))))

Structure

      g       U     A  A       U      u  ac 
ggucua ugcugug GGAAG CU GUGAUUU GUUGUU ug  g
|||||| ||||||| ||||| || ||||||| |||||| ||   
ucggau gcgacAC CCUUC GG CACUAAA CAACag au  u
      -       U     -  -       -      u  ca 

Annotation confidence High

Genome context

7: 3377222-3377305 [+]

Mature eca-miR-7-5p

• Accession: MIMAT0012905
• Description: Equus caballus eca-miR-7-5p mature miRNA
• Sequence: 15 - UGGAAGACUAGUGAUUUUGUUGUU - 38
• Evidence: experimental

Mature eca-miR-7-2-3p

• Accession: MIMAT0051366
• Description: Equus caballus eca-miR-7-2-3p mature miRNA
• Sequence: 53 - CAACAAAUCACGGCUUCCUCA - 73
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131