Stem-loop eca-mir-122

Accession

MI0012747

Description

Equus caballus eca-mir-122 precursor miRNA

Literature search

8 open access papers mention eca-mir-122
(123 sentences)

Sequence

11 reads, 2 reads per million, 1 experiments

agcugUGGAGUGUGACAAUGGUGUUUGuguccaaacuaucaaacgccauuaucacacuaaauagcu
((((((..(((((((.(((((((((((............))))))))))).)))))))..))))))

Structure

      GG       C           ugucc 
agcugU  AGUGUGA AAUGGUGUUUG     a
||||||  ||||||| |||||||||||      
ucgaua  ucacacu uuaccgcaaac     a
      aa       a           uauca 

Annotation confidence Not enough data

Genome context

chr8: 75662539-75662604 [+]

Mature eca-miR-122

• Accession: MIMAT0012995
• Description: Equus caballus eca-miR-122 mature miRNA
• Sequence: 6 - UGGAGUGUGACAAUGGUGUUUG - 27
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131