Stem-loop eca-mir-1204

Accession

MI0012754

Description

Equus caballus eca-mir-1204 precursor miRNA

Sequence

3 reads, 0.0 reads per million, 3 experiments

gccUCGUGGCCUGGUCCCCACUAUuugagaagagucacaucucggaggugaggaccgccucguggua
(((.((.(((..(((((.((((.(((((((.(.....).))))))))))).)))))))).)).))).

Structure

-   U  U   CU     C    A       a a 
 gcc CG GGC  GGUCC CACU Uuugaga g g
 ||| || |||  ||||| |||| ||||||| | u
 ugg gc ccg  ccagg gugg aggcucu c c
a   u  u   --     a    -       a a 

Annotation confidence Not enough data

Genome context

9: 71466250-71466316 [+]

Mature eca-miR-1204-5p

• Accession: MIMAT0013003
• Description: Equus caballus eca-miR-1204-5p mature miRNA
• Sequence: 4 - UCGUGGCCUGGUCCCCACUAU - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131