Stem-loop eca-mir-151

Accession

MI0012756

Description

Equus caballus eca-mir-151 precursor miRNA

Literature search

3 open access papers mention eca-mir-151
(5 sentences)

Sequence

7702899 reads, 8461.0 reads per million, 239 experiments

ccugcccUCGAGGAGCUCACAGUCUAGUAugucucauccccuaCUAGACUGAAGCUCCUUGAGGAcagg
((((.((((((((((((..((((((((((.(........).)))))))))).)))))))))))).))))

Structure

    c            CA          u ucu 
ccug ccUCGAGGAGCU  CAGUCUAGUA g   c
|||| ||||||||||||  |||||||||| |    
ggac GGAGUUCCUCGA  GUCAGAUCau c   a
    A            -A          c ccu 

Annotation confidence High

Genome context

9: 81983419-81983487 [-]

Mature eca-miR-151-5p

• Accession: MIMAT0013004
• Description: Equus caballus eca-miR-151-5p mature miRNA
• Sequence: 8 - UCGAGGAGCUCACAGUCUAGUA - 29
• Evidence: not_experimental

Mature eca-miR-151-3p

• Accession: MIMAT0061096
• Description: Equus caballus eca-miR-151-3p mature miRNA
• Sequence: 44 - CUAGACUGAAGCUCCUUGAGGA - 65
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131