Stem-loop eca-mir-769a

Accession

MI0012765

Description

Equus caballus eca-mir-769a precursor miRNA

Sequence

gcccucugcccGGAGACCUCUGGGUUCUGAGCUgugacguggcuucggagCUGGGAUCUCGGGGGUCUUGGUUcagggu
(((((..(((..((((((((((((.(((.((((.(((.......))).)))).))).)))))))))))))))..)))))

Structure

     cu   cG            U   G    g   cg 
gcccu  gcc  GAGACCUCUGGG UCU AGCU uga  u
|||||  |||  |||||||||||| ||| |||| |||  g
uggga  UGG  UUCUGGGGGCUC AGG UCga gcu  g
     cU   --            U   G    g   uc 

Annotation confidence Not enough data

Genome context

chr10: 16583595-16583673 [-]

Mature eca-miR-769a-5p

• Accession: MIMAT0013015
• Description: Equus caballus eca-miR-769a-5p mature miRNA
• Sequence: 12 - GGAGACCUCUGGGUUCUGAGCU - 33
• Evidence: not_experimental

Mature eca-miR-769a-3p

• Accession: MIMAT0013016
• Description: Equus caballus eca-miR-769a-3p mature miRNA
• Sequence: 51 - CUGGGAUCUCGGGGGUCUUGGUU - 73
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131