Stem-loop eca-mir-769b

Accession

MI0012766

Description

Equus caballus eca-mir-769b precursor miRNA

Sequence

89 reads, 28.0 reads per million, 12 experiments

gcccGGAAACCUCUGGGUUCUGAGCUgugacguggcuucugagcugggaucucgggggucuugguucaugguuugggucucuggguucugggc
((((((((.(((..(((.((((((((((((((.((((((((((.......)))))))))).))..)))))))))))).))).)))))))))))

Structure

        A   CU   U            --  u          cu 
gcccGGAA CCU  GGG UCUGAGCUguga  cg ggcuucugag  g
|||||||| |||  ||| ||||||||||||  || ||||||||||  g
cgggucuu ggg  cuc ggguuugguacu  gu cugggggcuc  g
        -   -u   u            ug  u          ua 

Annotation confidence Not enough data

Genome context

10: 16638859-16638951 [+]

Mature eca-miR-769b-5p

• Accession: MIMAT0013017
• Description: Equus caballus eca-miR-769b-5p mature miRNA
• Sequence: 5 - GGAAACCUCUGGGUUCUGAGCU - 26
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131