Stem-loop eca-mir-196a

Accession

MI0012775

Description

Equus caballus eca-mir-196a precursor miRNA

Gene family

MIPF0000031; mir-196

Sequence

2 reads, 0 reads per million, 1 experiments

gugaguUAGGUAGUUUCAUGUUGUUGGGccuggauuucugaacacaacgacauuaaaccacccgacucac
(((((((.(((.((((.((((((((((..(.........)..).))))))))).)))).))).)))))))

Structure

       A   A    C         - Gc ugg 
gugaguU GGU GUUU AUGUUGUUG G  c   a
||||||| ||| |||| ||||||||| |  |   u
cacucag cca caaa uacagcaac c  g   u
       c   c    u         a aa ucu 

Annotation confidence Not enough data

Genome context

chr11: 24681625-24681694 [-]

Mature eca-miR-196a

• Accession: MIMAT0013028
• Description: Equus caballus eca-miR-196a mature miRNA
• Sequence: 7 - UAGGUAGUUUCAUGUUGUUGGG - 28
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131