Stem-loop eca-mir-365-1

Accession

MI0012783

Description

Equus caballus eca-mir-365-1 precursor miRNA

Sequence

248732 reads, 191.0 reads per million, 170 experiments

aaugAGGGACUUUCAGGGGCAGCUGUGuuuucugacucagucaUAAUGCCCCUAAAAAUCCUUAUU
....(((((.(((.(((((((((((.(((....))).)))).....))))))).))).)))))...

Structure

aaug     C   C       -----    U   u 
    AGGGA UUU AGGGGCA     GCUG Guu u
    ||||| ||| |||||||     |||| |||  
    UUCCU AAA UCCCCGU     ugac cag c
-UUA     A   A       AAUac    u   u 

Annotation confidence Medium

Genome context

11: 41093763-41093828 [-]

Mature eca-miR-365-1-5p

• Accession: MIMAT0051386
• Description: Equus caballus eca-miR-365-1-5p mature miRNA
• Sequence: 5 - AGGGACUUUCAGGGGCAGCUGUG - 27
• Evidence: experimental

Mature eca-miR-365-3p

• Accession: MIMAT0013038
• Description: Equus caballus eca-miR-365-3p mature miRNA
• Sequence: 44 - UAAUGCCCCUAAAAAUCCUUAUU - 66
• Evidence: experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131