Stem-loop eca-mir-129b

Accession

MI0012789

Description

Equus caballus eca-mir-129b precursor miRNA

Sequence

77 reads, 12 reads per million, 1 experiments

gcgaauCUUUUUGCGGUCUGGGCUUGCuguacauaacucaauagccggAAGCCCUUACCCCAAAAAGCAUucgc
(((((((((((((.(((..(((((((((((..........)))))...))))))..))).))))))).))))))

Structure

      -       C   CU      ---     acau 
gcgaau CUUUUUG GGU  GGGCUU   GCugu    a
|||||| ||||||| |||  ||||||   |||||     
cgcuUA GAAAAAC CCA  CCCGAA   cgaua    a
      C       C   UU      ggc     acuc 

Annotation confidence High

Genome context

chr12: 8530962-8531035 [+]

Mature eca-miR-129b-5p

• Accession: MIMAT0013045
• Description: Equus caballus eca-miR-129b-5p mature miRNA
• Sequence: 7 - CUUUUUGCGGUCUGGGCUUGC - 27
• Evidence: not_experimental

Mature eca-miR-129b-3p

• Accession: MIMAT0013046
• Description: Equus caballus eca-miR-129b-3p mature miRNA
• Sequence: 49 - AAGCCCUUACCCCAAAAAGCAU - 70
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131