Stem-loop eca-mir-130a

Accession

MI0012790

Description

Equus caballus eca-mir-130a precursor miRNA

Literature search

1 open access papers mention eca-mir-130a
(1 sentences)

Sequence

3048 reads, 461 reads per million, 1 experiments

gagcucuuuucacauugugcuacugucugcaccuaccacuagCAGUGCAAUGUUAAAAGGGCAU
..((((((((.((((((((((.(((..............))).)))))))))).))))))))..

Structure

ga        c          a   ucugca 
  gcucuuuu acauugugcu cug      c
  |||||||| |||||||||| |||       
  CGGGAAAA UGUAACGUGA gau      c
UA        U          C   caccau 

Annotation confidence Not enough data

Genome context

chr12: 17657890-17657953 [+]

Mature eca-miR-130a

• Accession: MIMAT0013047
• Description: Equus caballus eca-miR-130a mature miRNA
• Sequence: 43 - CAGUGCAAUGUUAAAAGGGCAU - 64
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131