Stem-loop eca-mir-218-2

Accession

MI0012810

Description

Equus caballus eca-mir-218-2 precursor miRNA

Sequence

214570 reads, 277.0 reads per million, 183 experiments

UUGUGCUUGAUCUAACCAUGUGguggcacgauggaaacgGAACAUGGUUCUGUCAAGCACCGC
..(((((((((..((((((((.((..(......)..))...))))))))..)))))))))...

Structure

-UU         CU        --G  gg ac 
   GUGCUUGAU  AACCAUGU   gu  c  g
   |||||||||  ||||||||   ||  |   
   CACGAACUG  UUGGUACA   ca  g  a
CGC         UC        AGg  aa gu 

Annotation confidence High

Genome context

14: 11396076-11396138 [+]

Mature eca-miR-218-5p

• Accession: MIMAT0012928
• Description: Equus caballus eca-miR-218-5p mature miRNA
• Sequence: 1 - UUGUGCUUGAUCUAACCAUGUG - 22
• Evidence: experimental ; Illumina [1]

Mature eca-miR-218-2-3p

• Accession: MIMAT0051404
• Description: Equus caballus eca-miR-218-2-3p mature miRNA
• Sequence: 40 - GAACAUGGUUCUGUCAAGCACCGC - 63
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131