Stem-loop eca-mir-9a-2

Accession

MI0012814

Description

Equus caballus eca-mir-9a-2 precursor miRNA

Literature search

2 open access papers mention eca-mir-9a-2
(4 sentences)

Sequence

532506 reads, 1821.0 reads per million, 224 experiments

gaguuguuaUCUUUGGUUAUCUAGCUGUAUGAguguauuggucuucAUAAAGCUAGAUAACCGAAAGUaaaaacuccu
(((((.((((.(((((((((((((((.((((((.(.......))))))).))))))))))))))).)))).)))))..

Structure

--     g    C               G      u ua 
  gaguu uuaU UUUGGUUAUCUAGCU UAUGAg g  u
  ||||| |||| ||||||||||||||| |||||| |  u
  cucaa aaUG AAGCCAAUAGAUCGA AUAcuu c  g
uc     a    A               A      - ug 

Annotation confidence High

Genome context

14: 78864835-78864912 [+]

Mature eca-miR-9a-5p

• Accession: MIMAT0012967
• Description: Equus caballus eca-miR-9a-5p mature miRNA
• Sequence: 10 - UCUUUGGUUAUCUAGCUGUAUGA - 32
• Evidence: not_experimental

Mature eca-miR-9a-2-3p

• Accession: MIMAT0051354
• Description: Equus caballus eca-miR-9a-2-3p mature miRNA
• Sequence: 47 - AUAAAGCUAGAUAACCGAAAGU - 68
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131