Stem-loop eca-mir-9a-2

Accession

MI0012814

Description

Equus caballus eca-mir-9a-2 precursor miRNA

Literature search

2 open access papers mention eca-mir-9a-2
(4 sentences)

Sequence

111 reads, 17 reads per million, 1 experiments

gaguuguuaUCUUUGGUUAUCUAGCUGUAUGAguguauuggucuucauaaagcuagauaaccgaaaguaaaaacuccu
(((((.((((.(((((((((((((((.((((((.(.......))))))).))))))))))))))).)))).)))))..

Structure

--     g    C               G      u ua 
  gaguu uuaU UUUGGUUAUCUAGCU UAUGAg g  u
  ||||| |||| ||||||||||||||| |||||| |  u
  cucaa aaug aagccaauagaucga auacuu c  g
uc     a    a               a      - ug 

Annotation confidence Not enough data

Genome context

chr14: 78843147-78843224 [+]

Mature eca-miR-9a

• Accession: MIMAT0012967
• Description: Equus caballus eca-miR-9a mature miRNA
• Sequence: 10 - UCUUUGGUUAUCUAGCUGUAUGA - 32
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131