Stem-loop eca-mir-1301

Accession

MI0012815

Description

Equus caballus eca-mir-1301 precursor miRNA

Sequence

18 reads, 3 reads per million, 1 experiments

uguggggggucacucuaggcaccgcagcacugugcuggggaugUUGCAGCUGCCUGGGAGUGAUUUCacaca
((((.(((((((((((((((((.((((((((.......)).)))))).).))))).))))))))))).))))

Structure

    g           -     - c      -  gu 
ugug ggggucacucu aggca c gcagca cu  g
|||| ||||||||||| ||||| | |||||| ||  c
acac CUUUAGUGAGG UCCGU G CGUUgu gg  u
    a           G     C A      a  gg 

Annotation confidence Not enough data

Genome context

chr15: 70650469-70650540 [+]

Mature eca-miR-1301

• Accession: MIMAT0013070
• Description: Equus caballus eca-miR-1301 mature miRNA
• Sequence: 44 - UUGCAGCUGCCUGGGAGUGAUUUC - 67
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131