Stem-loop eca-let-7g

Accession

MI0012820

Description

Equus caballus eca-let-7g precursor miRNA

Literature search

11 open access papers mention eca-let-7g
(18 sentences)

Sequence

6561999 reads, 8051.0 reads per million, 237 experiments

ccaggcUGAGGUAGUAGUUUGUACAGUUugagggucuaugauaccacccgguacaggagauaaCUGUACAGGCCACUGCCUUGCcagg
((.(((.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).))))))))))).))

Structure

  a   U        A            ugagg    -a  a    a 
cc ggc GAGGUAGU GUUUGUACAGUU     gucu  ug uacc c
|| ||| |||||||| ||||||||||||     ||||  || ||||  
gg cCG UUCCGUCA CGGACAUGUCaa     uaga  ac augg c
  a   -        C            -----    gg  -    c 

Annotation confidence High

Genome context

16: 36958024-36958111 [+]

Mature eca-let-7g-5p

• Accession: MIMAT0013075
• Description: Equus caballus eca-let-7g-5p mature miRNA
• Sequence: 7 - UGAGGUAGUAGUUUGUACAGUU - 28
• Evidence: not_experimental

Mature eca-let-7g-3p

• Accession: MIMAT0051408
• Description: Equus caballus eca-let-7g-3p mature miRNA
• Sequence: 64 - CUGUACAGGCCACUGCCUUGC - 84
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131