Stem-loop eca-mir-191a

Accession

MI0012825

Description

Equus caballus eca-mir-191a precursor miRNA

Literature search

5 open access papers mention eca-mir-191a
(8 sentences)

Sequence

4064701 reads, 9952.0 reads per million, 239 experiments

agcgggCAACGGAAUCCCAAAAGCAGCUGUugucuccagagcauuccagCUGCGCUUGGAUUUCGUUCCCUGcu
((((((.((((((((((.((..(((((((.(((.......)))...)))))))..)))))))))))).))))))

Structure

      C          C  AA       --U   cu 
agcggg AACGGAAUCC AA  GCAGCUG   ugu  c
|||||| |||||||||| ||  |||||||   |||  c
ucGUCC UUGCUUUAGG UU  CGUCgac   acg  a
      C          -  CG       cuu   ag 

Annotation confidence High

Genome context

16: 39558141-39558214 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from eca-mir-191a

Mature eca-miR-191a-5p

• Accession: MIMAT0013079
• Description: Equus caballus eca-miR-191a-5p mature miRNA
• Sequence: 7 - CAACGGAAUCCCAAAAGCAGCUGU - 30
• Evidence: not_experimental

Mature eca-miR-191a-3p

• Accession: MIMAT0061107
• Description: Equus caballus eca-miR-191a-3p mature miRNA
• Sequence: 50 - CUGCGCUUGGAUUUCGUUCCCUG - 72
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131