Stem-loop eca-mir-19b

Accession

MI0012834

Description

Equus caballus eca-mir-19b precursor miRNA

Literature search

3 open access papers mention eca-mir-19b
(4 sentences)

Sequence

1393 reads, 211 reads per million, 1 experiments

guuaguuuugcagguuugcauccagcugugugauguucugcUGUGCAAAUCCAUGCAAAACUGA
.(((((((((((((((((((..((((.............)))))))))).)).)))))))))))

Structure

g           -  -      uc    ugugu 
 uuaguuuugca gg uuugca  cagc     g
 ||||||||||| || ||||||  ||||     a
 AGUCAAAACGU CC AAACGU  GUcg     u
-           A  U      --    ucuug 

Annotation confidence Not enough data

Genome context

chr17: 61793002-61793065 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from eca-mir-19b

Mature eca-miR-19b

• Accession: MIMAT0013087
• Description: Equus caballus eca-miR-19b mature miRNA
• Sequence: 42 - UGUGCAAAUCCAUGCAAAACUGA - 64
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131