Stem-loop eca-mir-92a

Accession

MI0012836

Description

Equus caballus eca-mir-92a precursor miRNA

Literature search

5 open access papers mention eca-mir-92a
(10 sentences)

Sequence

25951 reads, 3928 reads per million, 1 experiments

acagguugggaucgguugcaaugcuguguuucuguauggUAUUGCACUUGUCCCGGCCUGU
((((((((((((.(((.(((((((((((......)))))))))))))).))))))))))))

Structure

            c   u           uu 
acagguugggau ggu gcaaugcugug  u
|||||||||||| ||| |||||||||||   
UGUCCGGCCCUG UCA CGUUAUgguau  c
            U   -           gu 

Annotation confidence Not enough data

Genome context

chr17: 61793120-61793180 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from eca-mir-92a

Mature eca-miR-92a

• Accession: MIMAT0013089
• Description: Equus caballus eca-miR-92a mature miRNA
• Sequence: 40 - UAUUGCACUUGUCCCGGCCUGU - 61
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131