Stem-loop eca-mir-551b

Accession

MI0012841

Description

Equus caballus eca-mir-551b precursor miRNA

Sequence

6473 reads, 25.0 reads per million, 115 experiments

auGAAAUCAAGCGUGGGUGAGACCUggugcagaacgggaagGCGACCCAUACUUGGUUUCAG
.((((((((((.((((((....((((........))))......)))))).)))))))))).

Structure

a          C      --GAGA    gug 
 uGAAAUCAAG GUGGGU      CCUg   c
 |||||||||| ||||||      ||||    
 ACUUUGGUUC UACCCA      gggc   a
G          A      GCGgaa    aag 

Annotation confidence High

Genome context

19: 11547228-11547289 [+]

Mature eca-miR-551b-5p

• Accession: MIMAT0051424
• Description: Equus caballus eca-miR-551b-5p mature miRNA
• Sequence: 3 - GAAAUCAAGCGUGGGUGAGACCU - 25
• Evidence: not_experimental

Mature eca-miR-551b-3p

• Accession: MIMAT0013094
• Description: Equus caballus eca-miR-551b-3p mature miRNA
• Sequence: 42 - GCGACCCAUACUUGGUUUCAG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131